Additional file 7: of A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
Description
Table S5. Predicted SNP effects for the top 50 Internode DEGs. Genes correspond to those shown in Fig. 5. Columns 4â 31 are taken directly from the output of the program snpEff. Details can be found in the snpEff reference manual. Column 32 (GT.pvalue) is the significance of the Genotype x Time interaction term in the differential expression analysis. Columns 33â 37 are the Fold Changes at each developmental stage, calculated as Rio/PR22 (Sweet/Non-Sweet). (XLSX 19 kb)
Publication Date
1-1-2019
Publisher
figshare Academic Research System
DOI
10.6084/m9.figshare.8190758.v1
Document Type
Data Set
Recommended Citation
Kresovich, Stephen; Vermerris, Wilfred; Schmutz, Jeremy; Brenton, Zachary W.; Flowers, Dave; Wang, Yunsheng; Shu, Shengqiang; Yoshinaga, Yuko; Daum, Chris; Flinn, Barry S.; Jenkins, Jerry; Lipzen, Anna; Saski, Christopher; Xia, Penny; Barry, Kerrie; Cooper, Elizabeth A.; Luo, Feng (2019), "Additional file 7: of A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism", figshare Academic Research System, doi: 10.6084/m9.figshare.8190758.v1
https://doi.org/10.6084/m9.figshare.8190758.v1
Identifier
10.6084/m9.figshare.8190758.v1
Embargo Date
1-1-2019